Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 OLA1P2-201ENST00000395519 1264 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 OR2W2P-201ENST00000406313 909 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AC108724.1-201ENST00000481669 352 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AC147876.1-201ENST00000504408 322 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AP000920.1-201ENST00000531824 344 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 BAK1P2-201ENST00000532665 631 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AC020922.4-201ENST00000621389 339 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 SHMT1P1-201ENST00000419974 1312 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 KRT8P18-201ENST00000413425 1445 ntBASIC13.28□□□□□ -0.28
DKK4Q9UBT3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
DKK4Q9UBT3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 HYMAI-201ENST00000635591 3347 ntBASIC13.27□□□□□ -0.28
DKK4Q9UBT3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.27□□□□□ -0.28
DKK4Q9UBT3 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 RHOQP2-201ENST00000449922 579 ntBASIC13.27□□□□□ -0.29
DKK4Q9UBT3 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 IGKV1OR-2-201ENST00000457995 350 ntBASIC13.27□□□□□ -0.29
DKK4Q9UBT3 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 MIR4746-201ENST00000579802 71 ntBASIC13.27□□□□□ -0.29
DKK4Q9UBT3 MIR6125-201ENST00000618986 96 ntBASIC13.27□□□□□ -0.29
DKK4Q9UBT3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 FAM226B-201ENST00000602508 1490 ntBASIC13.27□□□□□ -0.29
DKK4Q9UBT3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
DKK4Q9UBT3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms