Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CCM2LQ9NUG4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AC123567.1-201ENST00000548294 1261 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SNX29P1-201ENST00000548357 1007 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 RN7SL219P-201ENST00000582872 296 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 CTBP2P3-201ENST00000585629 1255 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 GPR182-203ENST00000622922 591 ntBASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CCM2LQ9NUG4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 NCLP1-201ENST00000445357 1963 ntBASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AC007389.4-201ENST00000454674 793 ntBASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ELK1P1-201ENST00000485699 580 ntBASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 SRD5A3P1-201ENST00000603021 949 ntBASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 AC068587.10-201ENST00000641210 219 ntBASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.93□□□□□ -0.18
CCM2LQ9NUG4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms