Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AC012645.4-201ENST00000610691 1061 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AL162274.1-201ENST00000617191 1098 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 MBLAC2-202ENST00000514906 1936 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 TMBIM7P-202ENST00000641474 1516 ntBASIC13.93□□□□□ -0.18
BRF2Q9HAW0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.93□□□□□ -0.18
BRF2Q9HAW0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 REXO1L6P-201ENST00000603433 1515 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AL035633.1-201ENST00000406139 838 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 FAM58BP-201ENST00000439056 645 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AL645933.1-201ENST00000440087 609 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AC234783.1-201ENST00000441761 496 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 MIR6720-201ENST00000611664 98 ntBASIC13.92□□□□□ -0.18
BRF2Q9HAW0 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
BRF2Q9HAW0 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 E2F3P2-201ENST00000447755 1422 ntBASIC13.91□□□□□ -0.18
BRF2Q9HAW0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AC010327.5-201ENST00000586923 3061 ntBASIC13.91□□□□□ -0.18
BRF2Q9HAW0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
BRF2Q9HAW0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms