Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.97■□□□□ 0.47
UPF2Q9HAU5 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CSPG4P11-201ENST00000560634 4910 ntBASIC17.96■□□□□ 0.47
UPF2Q9HAU5 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AC020658.7-201ENST00000624274 2442 ntBASIC17.96■□□□□ 0.47
UPF2Q9HAU5 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 RNU1-114P-201ENST00000365297 166 ntBASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AC092580.3-201ENST00000430932 139 ntBASIC17.96■□□□□ 0.47
UPF2Q9HAU5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AC135586.1-201ENST00000539323 574 ntBASIC17.96■□□□□ 0.47
UPF2Q9HAU5 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 TNN-202ENST00000621086 4234 ntTSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UPF2Q9HAU5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.96■□□□□ 0.46
UPF2Q9HAU5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UPF2Q9HAU5 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UPF2Q9HAU5 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC072061.1-201ENST00000569710 2234 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 INTS4P2-202ENST00000614726 2019 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC241585.1-201ENST00000433527 519 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC097493.3-201ENST00000509725 367 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AP001582.1-201ENST00000525856 295 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SORD2P-201ENST00000558556 1069 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SPDYE22P-201ENST00000582158 798 ntBASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UPF2Q9HAU5 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms