Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.7□□□□□ -0.22
AMBRA1Q9C0C7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 LRRC59-203ENST00000576448 1531 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AL138725.1-201ENST00000407347 1314 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 KRT8P35-201ENST00000483942 1338 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 COX5BP8-201ENST00000416911 349 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 IGHV3-71-201ENST00000523324 359 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 CR383656.2-201ENST00000548656 2254 ntBASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AMBRA1Q9C0C7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AP006294.1-201ENST00000415407 339 ntBASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 FO681548.1-201ENST00000455617 1132 ntBASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 CTBP2P3-201ENST00000585629 1255 ntBASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 AP005019.2-201ENST00000615104 511 ntBASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AMBRA1Q9C0C7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms