Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.14□□□□□ -0.63
VGLL1Q99990 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.14□□□□□ -0.63
VGLL1Q99990 GIMAP3P-201ENST00000495150 836 ntBASIC11.14□□□□□ -0.63
VGLL1Q99990 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.14□□□□□ -0.63
VGLL1Q99990 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.14□□□□□ -0.63
VGLL1Q99990 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.14□□□□□ -0.63
VGLL1Q99990 AC138761.1-201ENST00000584393 385 ntBASIC11.14□□□□□ -0.63
VGLL1Q99990 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.14□□□□□ -0.63
VGLL1Q99990 AC006538.3-201ENST00000612495 578 ntBASIC11.14□□□□□ -0.63
VGLL1Q99990 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
VGLL1Q99990 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
VGLL1Q99990 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC11.14□□□□□ -0.63
VGLL1Q99990 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
VGLL1Q99990 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.14□□□□□ -0.63
VGLL1Q99990 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VGLL1Q99990 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.13□□□□□ -0.63
VGLL1Q99990 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 MEP1AP4-201ENST00000423244 1087 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.13□□□□□ -0.63
VGLL1Q99990 TMEM198B-204ENST00000484016 896 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 AC104596.2-201ENST00000512793 793 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.13□□□□□ -0.63
VGLL1Q99990 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.13□□□□□ -0.63
VGLL1Q99990 RRP7BP-205ENST00000566851 833 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.13□□□□□ -0.63
VGLL1Q99990 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.13□□□□□ -0.63
VGLL1Q99990 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 GPALPP1-207ENST00000611650 899 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 AL603764.1-201ENST00000636452 321 ntBASIC11.13□□□□□ -0.63
VGLL1Q99990 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
VGLL1Q99990 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.13□□□□□ -0.63
VGLL1Q99990 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
VGLL1Q99990 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC11.13□□□□□ -0.63
VGLL1Q99990 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms