Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.7■□□□□ 0.26
CDK5RAP2Q96SN8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 GOLGA2P8-201ENST00000505201 779 ntBASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AC013553.1-201ENST00000560906 267 ntBASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AC005912.2-201ENST00000619492 2400 ntBASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CDK5RAP2Q96SN8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AL049840.2-201ENST00000602722 535 ntBASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 RCC2P1-201ENST00000452257 1476 ntBASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.68■□□□□ 0.26
CDK5RAP2Q96SN8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 AC005722.1-201ENST00000431878 964 ntBASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.67■□□□□ 0.26
CDK5RAP2Q96SN8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms