Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRIM47Q96LD4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC232323.1-201ENST00000540724 2099 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 RN7SKP230-201ENST00000365642 335 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC130709.1-201ENST00000484779 1212 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC005632.3-201ENST00000605544 308 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 REXO1L4P-201ENST00000605109 1937 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRIM47Q96LD4 AC023908.3-201ENST00000564211 3047 ntBASIC17.05■□□□□ 0.32
TRIM47Q96LD4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AC009884.2-201ENST00000603110 324 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AC008825.2-201ENST00000603374 718 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 MIR6769A-201ENST00000617340 73 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 MIR6858-201ENST00000620733 67 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AL161773.1-201ENST00000624845 863 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 AL359258.3-201ENST00000622910 2331 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 CICP14-201ENST00000629111 2732 ntBASIC17.04■□□□□ 0.32
TRIM47Q96LD4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM47Q96LD4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms