Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 FAM90A7P-201ENST00000382628 1395 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 FAM90A23P-201ENST00000400136 1395 ntBASIC12.79□□□□□ -0.36
TMEM54Q969K7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.79□□□□□ -0.36
TMEM54Q969K7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TMEM54Q969K7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AL591471.1-201ENST00000621855 229 ntBASIC12.78□□□□□ -0.36
TMEM54Q969K7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AC004899.1-201ENST00000424687 1714 ntBASIC12.78□□□□□ -0.36
TMEM54Q969K7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AHCYP4-201ENST00000419201 1315 ntBASIC12.78□□□□□ -0.36
TMEM54Q969K7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TMEM54Q969K7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.78□□□□□ -0.36
TMEM54Q969K7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.77□□□□□ -0.36
TMEM54Q969K7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TMEM54Q969K7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.77□□□□□ -0.36
TMEM54Q969K7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms