Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-CQ95604 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-CQ95604 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-CQ95604 HMGB1P8-201ENST00000558211 949 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 ANKRD26P1-203ENST00000569528 966 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 EEF1DP7-201ENST00000580496 513 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 PRMT1P1-201ENST00000604252 1009 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 AL353729.2-201ENST00000605859 1249 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC14.81□□□□□ -0.04
HLA-CQ95604 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-CQ95604 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-CQ95604 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
HLA-CQ95604 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-CQ95604 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-CQ95604 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-CQ95604 KRT8P18-201ENST00000413425 1445 ntBASIC14.81□□□□□ -0.04
HLA-CQ95604 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-CQ95604 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-CQ95604 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-CQ95604 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-CQ95604 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 RN7SL351P-201ENST00000469306 248 ntBASIC14.8□□□□□ -0.04
HLA-CQ95604 RN7SL578P-201ENST00000477781 283 ntBASIC14.8□□□□□ -0.04
HLA-CQ95604 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 ACY3-202ENST00000529256 933 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-CQ95604 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-CQ95604 RN7SL556P-201ENST00000582856 298 ntBASIC14.8□□□□□ -0.04
HLA-CQ95604 AC016582.2-202ENST00000587765 1094 ntBASIC14.8□□□□□ -0.04
HLA-CQ95604 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLA-CQ95604 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.8□□□□□ -0.04
HLA-CQ95604 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-CQ95604 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-CQ95604 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-CQ95604 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-CQ95604 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-CQ95604 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-CQ95604 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 MIR339-201ENST00000362153 94 ntBASIC14.79□□□□□ -0.04
HLA-CQ95604 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-CQ95604 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-CQ95604 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HLA-CQ95604 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-CQ95604 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms