Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 NDUFB10P1-201ENST00000567319 521 ntBASIC12.99□□□□□ -0.33
RNF138Q8WVD3 RN7SL455P-201ENST00000580629 282 ntBASIC12.99□□□□□ -0.33
RNF138Q8WVD3 CU633904.3-201ENST00000624042 1029 ntBASIC12.99□□□□□ -0.33
RNF138Q8WVD3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RNF138Q8WVD3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AL590824.1-201ENST00000403828 1349 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC009560.1-201ENST00000620208 434 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC079336.7-201ENST00000623428 1078 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC006453.1-201ENST00000636037 1257 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 MST1P2-201ENST00000457982 2291 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 AC067931.2-201ENST00000623655 2003 ntBASIC12.98□□□□□ -0.33
RNF138Q8WVD3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RNF138Q8WVD3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AL928921.2-201ENST00000641325 2442 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 BCYRN1-201ENST00000418539 200 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC007274.2-201ENST00000421675 662 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms