Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PTCD2Q8WV60 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC131649.1-201ENST00000569215 1313 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 TPM3P8-201ENST00000330554 643 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AL353626.3-201ENST00000413399 657 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 RANP7-201ENST00000418085 644 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC103988.2-201ENST00000561804 725 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC011458.1-201ENST00000604034 617 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.93□□□□□ -0.02
PTCD2Q8WV60 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.93□□□□□ -0.02
PTCD2Q8WV60 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC139749.1-202ENST00000617529 3139 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC005252.3-201ENST00000623855 2258 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 FAM21FP-201ENST00000426241 1131 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 YBX1P6-201ENST00000442962 1002 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC098826.2-201ENST00000452011 651 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AC016550.3-201ENST00000515706 767 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 AP001981.1-201ENST00000531132 738 ntBASIC14.92□□□□□ -0.02
PTCD2Q8WV60 MIR4760-201ENST00000585040 80 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms