Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CLDND2Q8NHS1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 INE2-201ENST00000630399 1874 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AC126335.2-201ENST00000623362 4637 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 KRT8P29-201ENST00000420409 1371 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 LILRP1-201ENST00000444199 1370 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AC097359.2-201ENST00000604992 2389 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 NDUFV2P1-201ENST00000596415 907 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL358472.3-201ENST00000608147 415 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL021578.1-201ENST00000613646 709 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 AL023803.2-201ENST00000620080 638 ntBASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CLDND2Q8NHS1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 TCAF1P1-201ENST00000414990 2232 ntBASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 DGCR9-201ENST00000609630 2415 ntBASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
CLDND2Q8NHS1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 AC020910.5-201ENST00000623668 1865 ntBASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CLDND2Q8NHS1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms