Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 PPY2P-201ENST00000582808 702 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 BX088702.1-201ENST00000610784 235 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AC002472.3-201ENST00000640124 621 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 Z82170.1-201ENST00000625081 3192 ntBASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.81□□□□□ -0.2
SIMC1Q8NDZ2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 BOLA2P3-201ENST00000404566 256 ntBASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CHMP1AP1-201ENST00000445563 662 ntBASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TPT1P11-201ENST00000458482 498 ntBASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC092658.1-201ENST00000505836 891 ntBASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SIMC1Q8NDZ2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC215219.1-201ENST00000400706 1817 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms