Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 PDIA3P2-201ENST00000428073 158 ntBASIC15.87■□□□□ 0.13
VPS52Q8N1B4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 AC012044.1-201ENST00000603431 297 ntBASIC15.87■□□□□ 0.13
VPS52Q8N1B4 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 AC006480.2-201ENST00000609770 1337 ntBASIC15.87■□□□□ 0.13
VPS52Q8N1B4 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.87■□□□□ 0.13
VPS52Q8N1B4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VPS52Q8N1B4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 FGD5P1-202ENST00000614866 2498 ntBASIC15.86■□□□□ 0.13
VPS52Q8N1B4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 RTN3P1-201ENST00000536295 711 ntBASIC15.86■□□□□ 0.13
VPS52Q8N1B4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 AP000346.4-201ENST00000614827 381 ntBASIC15.86■□□□□ 0.13
VPS52Q8N1B4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 LILRP1-201ENST00000444199 1370 ntBASIC15.86■□□□□ 0.13
VPS52Q8N1B4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
VPS52Q8N1B4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 AJ011931.1-201ENST00000618749 2492 ntBASIC15.85■□□□□ 0.13
VPS52Q8N1B4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VPS52Q8N1B4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms