Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 KRT8P31-201ENST00000504812 1408 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AC090502.4-201ENST00000551714 1386 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 BAK1P1-201ENST00000317045 636 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 RPSAP15-201ENST00000448168 861 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 CICP12-201ENST00000455801 843 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 RN7SL81P-201ENST00000493781 261 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 BX088702.1-201ENST00000610784 235 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AC073911.3-201ENST00000624401 631 ntBASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CTC1Q2NKJ3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 HIST2H2BA-201ENST00000412169 381 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 AL807761.2-201ENST00000422849 729 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 XBP1P1-201ENST00000436573 652 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ALG1L13P-202ENST00000519320 584 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 AC107464.3-201ENST00000609172 737 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PKD1P5-201ENST00000532415 10291 ntBASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.54■□□□□ 0.08
CTC1Q2NKJ3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
CTC1Q2NKJ3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms