Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AC100757.4-201ENST00000626934 759 ntBASIC18.81■□□□□ 0.6
CCDC27Q2M243 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 ABR-228ENST00000574437 3196 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 KRT8P21-201ENST00000430398 1491 ntBASIC18.8■□□□□ 0.6
CCDC27Q2M243 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.8■□□□□ 0.6
CCDC27Q2M243 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 AC093752.3-201ENST00000567343 901 ntBASIC18.8■□□□□ 0.6
CCDC27Q2M243 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 AC243960.2-201ENST00000600996 747 ntBASIC18.8■□□□□ 0.6
CCDC27Q2M243 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 LINC01165-201ENST00000445190 1623 ntBASIC18.8■□□□□ 0.6
CCDC27Q2M243 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC27Q2M243 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC27Q2M243 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC27Q2M243 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC27Q2M243 AL008707.1-201ENST00000422498 534 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms