Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 ACTBP14-201ENST00000411655 1089 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 LINP1-201ENST00000417112 917 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 AC136604.1-202ENST00000425471 771 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.34■□□□□ 0.21
SREBF2Q12772 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.34■□□□□ 0.21
SREBF2Q12772 AC091304.3-201ENST00000566500 716 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC16.34■□□□□ 0.21
SREBF2Q12772 AC132825.4-202ENST00000578792 434 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 RN7SL524P-201ENST00000581152 300 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 AC006116.2-201ENST00000589958 988 ntBASIC16.34■□□□□ 0.21
SREBF2Q12772 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.34■□□□□ 0.21
SREBF2Q12772 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC16.34■□□□□ 0.21
SREBF2Q12772 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.34■□□□□ 0.21
SREBF2Q12772 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.34■□□□□ 0.21
SREBF2Q12772 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SREBF2Q12772 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.33■□□□□ 0.21
SREBF2Q12772 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SREBF2Q12772 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SREBF2Q12772 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SREBF2Q12772 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.33■□□□□ 0.21
SREBF2Q12772 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.33■□□□□ 0.21
SREBF2Q12772 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.33■□□□□ 0.21
SREBF2Q12772 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
SREBF2Q12772 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 RPL3P2-204ENST00000413027 1203 ntBASIC16.33■□□□□ 0.2
SREBF2Q12772 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.33■□□□□ 0.2
SREBF2Q12772 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 AL161932.2-201ENST00000435436 679 ntBASIC16.33■□□□□ 0.2
SREBF2Q12772 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 AC025594.1-201ENST00000469533 543 ntBASIC16.33■□□□□ 0.2
SREBF2Q12772 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.33■□□□□ 0.2
SREBF2Q12772 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC16.33■□□□□ 0.2
SREBF2Q12772 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.33■□□□□ 0.2
SREBF2Q12772 AL008638.4-201ENST00000624792 1315 ntBASIC16.33■□□□□ 0.2
SREBF2Q12772 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 AC007952.5-201ENST00000572818 1486 ntBASIC16.33■□□□□ 0.2
SREBF2Q12772 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.33■□□□□ 0.2
SREBF2Q12772 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SREBF2Q12772 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.33■□□□□ 0.2
SREBF2Q12772 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SREBF2Q12772 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
SREBF2Q12772 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SREBF2Q12772 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SREBF2Q12772 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms