Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AL033527.4-201ENST00000641026 673 ntBASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 AL008718.2-201ENST00000609206 1313 ntBASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NIPAL4Q0D2K0 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC090643.2-201ENST00000623442 2029 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 BTBD6P1-201ENST00000412176 1267 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 TUBB1P2-201ENST00000422712 1306 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 TUBB1P1-201ENST00000503144 1300 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 AC023794.5-201ENST00000564380 2157 ntBASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NIPAL4Q0D2K0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NIPAL4Q0D2K0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms