Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.6□□□□□ -0.23
CD47Q08722 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 MIR770-201ENST00000390219 98 ntBASIC13.6□□□□□ -0.23
CD47Q08722 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.6□□□□□ -0.23
CD47Q08722 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 RRP7BP-205ENST00000566851 833 ntBASIC13.6□□□□□ -0.23
CD47Q08722 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 MIR6074-201ENST00000612054 107 ntBASIC13.6□□□□□ -0.23
CD47Q08722 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
CD47Q08722 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 PCDHB18P-202ENST00000526308 3197 ntBASIC13.6□□□□□ -0.23
CD47Q08722 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CD47Q08722 NCLP1-201ENST00000445357 1963 ntBASIC13.6□□□□□ -0.23
CD47Q08722 AC004899.2-201ENST00000622993 3860 ntBASIC13.6□□□□□ -0.23
CD47Q08722 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CD47Q08722 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CD47Q08722 AL138799.1-201ENST00000448213 1675 ntBASIC13.59□□□□□ -0.23
CD47Q08722 PEG13-201ENST00000631594 5667 ntBASIC13.59□□□□□ -0.23
CD47Q08722 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 DMBT1P1-203ENST00000636837 4628 ntBASIC13.59□□□□□ -0.23
CD47Q08722 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.59□□□□□ -0.23
CD47Q08722 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.59□□□□□ -0.23
CD47Q08722 AC027796.2-201ENST00000575326 344 ntBASIC13.59□□□□□ -0.23
CD47Q08722 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.59□□□□□ -0.23
CD47Q08722 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.59□□□□□ -0.23
CD47Q08722 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 AP002761.4-201ENST00000565433 3361 ntBASIC13.59□□□□□ -0.23
CD47Q08722 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.59□□□□□ -0.23
CD47Q08722 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.59□□□□□ -0.23
CD47Q08722 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CD47Q08722 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CD47Q08722 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CD47Q08722 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms