Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDH1Q08174 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDH1Q08174 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDH1Q08174 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 AL157407.1-201ENST00000435784 904 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 U91328.1-201ENST00000437528 223 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 HIST2H2BB-201ENST00000449108 381 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDH1Q08174 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDH1Q08174 KRT17P8-201ENST00000540749 863 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDH1Q08174 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDH1Q08174 DUX4L45-201ENST00000566406 1057 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDH1Q08174 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PCDH1Q08174 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCDH1Q08174 TUBB8P4-201ENST00000511806 1324 ntBASIC14.08□□□□□ -0.16
PCDH1Q08174 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDH1Q08174 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDH1Q08174 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDH1Q08174 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PCDH1Q08174 REXO1L6P-201ENST00000603433 1515 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDH1Q08174 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDH1Q08174 FAM58BP-201ENST00000439056 645 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 AL645933.1-201ENST00000440087 609 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.07□□□□□ -0.16
PCDH1Q08174 MIR4783-201ENST00000580343 82 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCDH1Q08174 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 AC090643.2-201ENST00000623442 2029 ntBASIC14.07□□□□□ -0.16
PCDH1Q08174 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDH1Q08174 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDH1Q08174 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 AC011474.4-201ENST00000623523 2076 ntBASIC14.06□□□□□ -0.16
PCDH1Q08174 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.06□□□□□ -0.16
PCDH1Q08174 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCDH1Q08174 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms