Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.27□□□□□ -0.13
CDK3Q00526 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.27□□□□□ -0.13
CDK3Q00526 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK3Q00526 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.27□□□□□ -0.13
CDK3Q00526 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.27□□□□□ -0.13
CDK3Q00526 RTN3P1-201ENST00000536295 711 ntBASIC14.27□□□□□ -0.13
CDK3Q00526 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 AC242376.1-201ENST00000559033 726 ntBASIC14.27□□□□□ -0.13
CDK3Q00526 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.27□□□□□ -0.13
CDK3Q00526 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
CDK3Q00526 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CDK3Q00526 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDK3Q00526 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CDK3Q00526 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 ELK2AP-201ENST00000392510 1007 ntBASIC14.26□□□□□ -0.13
CDK3Q00526 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.26□□□□□ -0.13
CDK3Q00526 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDK3Q00526 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.26□□□□□ -0.13
CDK3Q00526 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.26□□□□□ -0.13
CDK3Q00526 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 AC140658.4-201ENST00000561990 352 ntBASIC14.26□□□□□ -0.13
CDK3Q00526 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 AL022334.2-201ENST00000610000 484 ntBASIC14.26□□□□□ -0.13
CDK3Q00526 AC079336.7-201ENST00000623428 1078 ntBASIC14.26□□□□□ -0.13
CDK3Q00526 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDK3Q00526 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDK3Q00526 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDK3Q00526 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.25□□□□□ -0.13
CDK3Q00526 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.25□□□□□ -0.13
CDK3Q00526 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.25□□□□□ -0.13
CDK3Q00526 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDK3Q00526 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.25□□□□□ -0.13
CDK3Q00526 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AC134698.3-201ENST00000523880 214 ntBASIC14.25□□□□□ -0.13
CDK3Q00526 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.25□□□□□ -0.13
CDK3Q00526 AL109837.1-201ENST00000603272 613 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms