Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 DPM3-202ENST00000368399 517 ntBASIC13.99□□□□□ -0.17
VSX2P58304 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 AL645933.1-201ENST00000440087 609 ntBASIC13.99□□□□□ -0.17
VSX2P58304 EIF4HP1-201ENST00000453115 687 ntBASIC13.99□□□□□ -0.17
VSX2P58304 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.99□□□□□ -0.17
VSX2P58304 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.99□□□□□ -0.17
VSX2P58304 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.99□□□□□ -0.17
VSX2P58304 RBM8B-201ENST00000555532 525 ntBASIC13.99□□□□□ -0.17
VSX2P58304 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.99□□□□□ -0.17
VSX2P58304 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
VSX2P58304 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
VSX2P58304 AC009093.10-201ENST00000641956 1442 ntBASIC13.98□□□□□ -0.17
VSX2P58304 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.98□□□□□ -0.17
VSX2P58304 ST20-AS1-201ENST00000560255 4223 ntBASIC13.98□□□□□ -0.17
VSX2P58304 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.98□□□□□ -0.17
VSX2P58304 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 AC113367.3-201ENST00000508316 1912 ntBASIC13.98□□□□□ -0.17
VSX2P58304 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VSX2P58304 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
VSX2P58304 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.98□□□□□ -0.17
VSX2P58304 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.98□□□□□ -0.17
VSX2P58304 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
VSX2P58304 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.98□□□□□ -0.17
VSX2P58304 AC022447.6-201ENST00000515522 438 ntBASIC13.98□□□□□ -0.17
VSX2P58304 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.98□□□□□ -0.17
VSX2P58304 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 AL160314.3-201ENST00000556041 767 ntBASIC13.98□□□□□ -0.17
VSX2P58304 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.98□□□□□ -0.17
VSX2P58304 AC090164.2-201ENST00000611487 516 ntBASIC13.98□□□□□ -0.17
VSX2P58304 AC068587.8-201ENST00000641239 219 ntBASIC13.98□□□□□ -0.17
VSX2P58304 AC117489.1-201ENST00000625169 3217 ntBASIC13.98□□□□□ -0.17
VSX2P58304 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 AGGF1P1-201ENST00000509500 2073 ntBASIC13.98□□□□□ -0.17
VSX2P58304 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.98□□□□□ -0.17
VSX2P58304 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.98□□□□□ -0.17
VSX2P58304 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.98□□□□□ -0.17
VSX2P58304 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VSX2P58304 AC136759.1-202ENST00000530858 2194 ntBASIC13.98□□□□□ -0.17
VSX2P58304 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.97□□□□□ -0.17
VSX2P58304 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VSX2P58304 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.97□□□□□ -0.17
VSX2P58304 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VSX2P58304 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms