Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.62□□□□□ -0.23
PER3P56645 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.62□□□□□ -0.23
PER3P56645 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.62□□□□□ -0.23
PER3P56645 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.62□□□□□ -0.23
PER3P56645 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.62□□□□□ -0.23
PER3P56645 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.62□□□□□ -0.23
PER3P56645 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PER3P56645 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.62□□□□□ -0.23
PER3P56645 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
PER3P56645 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 AC007787.1-201ENST00000588095 1583 ntBASIC13.62□□□□□ -0.23
PER3P56645 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PER3P56645 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PER3P56645 MIR33B-201ENST00000385104 96 ntBASIC13.61□□□□□ -0.23
PER3P56645 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AC104457.1-201ENST00000401024 814 ntBASIC13.61□□□□□ -0.23
PER3P56645 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 SPTLC1P5-201ENST00000450718 252 ntBASIC13.61□□□□□ -0.23
PER3P56645 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AC021723.1-201ENST00000486306 515 ntBASIC13.61□□□□□ -0.23
PER3P56645 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.61□□□□□ -0.23
PER3P56645 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 FGFR3P5-201ENST00000564496 886 ntBASIC13.61□□□□□ -0.23
PER3P56645 SAMD11P1-201ENST00000571429 661 ntBASIC13.61□□□□□ -0.23
PER3P56645 PPY2P-201ENST00000582808 702 ntBASIC13.61□□□□□ -0.23
PER3P56645 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.61□□□□□ -0.23
PER3P56645 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.61□□□□□ -0.23
PER3P56645 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.61□□□□□ -0.23
PER3P56645 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PER3P56645 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PER3P56645 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.6□□□□□ -0.23
PER3P56645 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PER3P56645 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms