Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.51■□□□□ 0.07
CDH8P55286 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CDH8P55286 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.51■□□□□ 0.07
CDH8P55286 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 AC064801.2-201ENST00000625052 1303 ntBASIC15.5■□□□□ 0.07
CDH8P55286 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH8P55286 OR2R1P-201ENST00000441404 914 ntBASIC15.5■□□□□ 0.07
CDH8P55286 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH8P55286 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 MARK2P5-201ENST00000507649 634 ntBASIC15.5■□□□□ 0.07
CDH8P55286 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH8P55286 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 PGAM1P5-201ENST00000548011 764 ntBASIC15.5■□□□□ 0.07
CDH8P55286 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH8P55286 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.5■□□□□ 0.07
CDH8P55286 AC124068.2-201ENST00000569473 1109 ntBASIC15.5■□□□□ 0.07
CDH8P55286 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.5■□□□□ 0.07
CDH8P55286 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 AC020914.3-201ENST00000594712 304 ntBASIC15.5■□□□□ 0.07
CDH8P55286 AL132994.2-201ENST00000603120 687 ntBASIC15.5■□□□□ 0.07
CDH8P55286 AL645939.5-201ENST00000606834 243 ntBASIC15.5■□□□□ 0.07
CDH8P55286 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 AC138649.2-201ENST00000615886 705 ntBASIC15.5■□□□□ 0.07
CDH8P55286 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CDH8P55286 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 AC244452.3-201ENST00000636814 210 ntBASIC15.5■□□□□ 0.07
CDH8P55286 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.5■□□□□ 0.07
CDH8P55286 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CDH8P55286 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.5■□□□□ 0.07
CDH8P55286 AC152010.1-201ENST00000415779 2006 ntBASIC15.5■□□□□ 0.07
CDH8P55286 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH8P55286 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CDH8P55286 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CDH8P55286 TUBBP5-203ENST00000508529 1334 ntBASIC15.49■□□□□ 0.07
CDH8P55286 AL133338.1-201ENST00000565695 1517 ntBASIC15.49■□□□□ 0.07
CDH8P55286 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDH8P55286 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.49■□□□□ 0.07
CDH8P55286 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CDH8P55286 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.49■□□□□ 0.07
CDH8P55286 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH8P55286 XBP1P1-201ENST00000436573 652 ntBASIC15.49■□□□□ 0.07
CDH8P55286 BX284668.4-201ENST00000453917 508 ntBASIC15.49■□□□□ 0.07
CDH8P55286 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.49■□□□□ 0.07
CDH8P55286 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.49■□□□□ 0.07
CDH8P55286 AC026740.1-201ENST00000607068 791 ntBASIC15.49■□□□□ 0.07
CDH8P55286 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDH8P55286 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDH8P55286 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms