Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCN2P51788 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLCN2P51788 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCN2P51788 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCN2P51788 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CLCN2P51788 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCN2P51788 AL139094.1-201ENST00000405549 1188 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 AC007551.1-201ENST00000457394 519 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 FTH1P14-201ENST00000482930 551 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 AC104989.1-201ENST00000519711 778 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CLCN2P51788 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 AP005482.1-201ENST00000563722 1273 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCN2P51788 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCN2P51788 AL008721.1-201ENST00000609964 604 ntBASIC14.21□□□□□ -0.13
CLCN2P51788 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCN2P51788 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CLCN2P51788 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCN2P51788 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.21□□□□□ -0.14
CLCN2P51788 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLCN2P51788 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.21□□□□□ -0.14
CLCN2P51788 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CLCN2P51788 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CLCN2P51788 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLCN2P51788 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 LRRC59-203ENST00000576448 1531 ntBASIC14.2□□□□□ -0.14
CLCN2P51788 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CLCN2P51788 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCN2P51788 AC022210.1-201ENST00000449856 793 ntBASIC14.2□□□□□ -0.14
CLCN2P51788 KLF2P4-201ENST00000451959 1225 ntBASIC14.2□□□□□ -0.14
CLCN2P51788 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCN2P51788 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.2□□□□□ -0.14
CLCN2P51788 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLCN2P51788 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 PDIA3P1-201ENST00000471856 1510 ntBASIC14.2□□□□□ -0.14
CLCN2P51788 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLCN2P51788 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.2□□□□□ -0.14
CLCN2P51788 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLCN2P51788 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms