Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 AC104457.1-201ENST00000401024 814 ntBASIC13.03□□□□□ -0.32
SRP9P49458 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.03□□□□□ -0.32
SRP9P49458 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 KRT18P25-201ENST00000508931 1278 ntBASIC13.03□□□□□ -0.32
SRP9P49458 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 AP005018.1-201ENST00000525475 301 ntBASIC13.03□□□□□ -0.32
SRP9P49458 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.03□□□□□ -0.32
SRP9P49458 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.03□□□□□ -0.32
SRP9P49458 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.03□□□□□ -0.32
SRP9P49458 AC114271.1-201ENST00000612689 2813 ntBASIC13.03□□□□□ -0.32
SRP9P49458 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.03□□□□□ -0.32
SRP9P49458 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 AC073548.1-201ENST00000624088 1882 ntBASIC13.03□□□□□ -0.32
SRP9P49458 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
SRP9P49458 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SRP9P49458 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SRP9P49458 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.03□□□□□ -0.32
SRP9P49458 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
SRP9P49458 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SRP9P49458 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.02□□□□□ -0.32
SRP9P49458 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SRP9P49458 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SRP9P49458 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.02□□□□□ -0.32
SRP9P49458 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.02□□□□□ -0.32
SRP9P49458 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SRP9P49458 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SRP9P49458 AC068760.1-201ENST00000493579 1953 ntBASIC13.02□□□□□ -0.32
SRP9P49458 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SRP9P49458 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 ACKR1-201ENST00000368121 1240 ntBASIC13.02□□□□□ -0.33
SRP9P49458 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 AC007389.4-201ENST00000454674 793 ntBASIC13.02□□□□□ -0.33
SRP9P49458 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.02□□□□□ -0.33
SRP9P49458 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 AC005225.4-201ENST00000557330 545 ntBASIC13.02□□□□□ -0.33
SRP9P49458 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.02□□□□□ -0.33
SRP9P49458 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.02□□□□□ -0.33
SRP9P49458 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 AC093525.8-201ENST00000624099 1342 ntBASIC13.02□□□□□ -0.33
SRP9P49458 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 LILRP1-201ENST00000444199 1370 ntBASIC13.02□□□□□ -0.33
SRP9P49458 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 AC111170.3-201ENST00000624282 2464 ntBASIC13.02□□□□□ -0.33
SRP9P49458 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SRP9P49458 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.02□□□□□ -0.33
SRP9P49458 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SRP9P49458 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SRP9P49458 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 AGGF1P1-201ENST00000509500 2073 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms