Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC021016.3-201ENST00000608367 477 ntBASIC17.05■□□□□ 0.32
NEDD4P46934 MEG3_2.1-201ENST00000611456 105 ntBASIC17.05■□□□□ 0.32
NEDD4P46934 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD4P46934 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NEDD4P46934 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.05■□□□□ 0.32
NEDD4P46934 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NEDD4P46934 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NEDD4P46934 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD4P46934 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD4P46934 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 AL596276.2-201ENST00000447525 331 ntBASIC17.04■□□□□ 0.32
NEDD4P46934 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.04■□□□□ 0.32
NEDD4P46934 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.04■□□□□ 0.32
NEDD4P46934 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NEDD4P46934 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.04■□□□□ 0.32
NEDD4P46934 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NEDD4P46934 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 AC005077.2-201ENST00000449786 690 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.03■□□□□ 0.32
NEDD4P46934 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC17.03■□□□□ 0.32
NEDD4P46934 RN7SL774P-201ENST00000577467 290 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 AL139099.5-201ENST00000635274 300 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.03■□□□□ 0.32
NEDD4P46934 MST1P2-201ENST00000457982 2291 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.03■□□□□ 0.32
NEDD4P46934 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NEDD4P46934 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NEDD4P46934 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
NEDD4P46934 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NEDD4P46934 AC008132.1-202ENST00000342005 1389 ntBASIC17.02■□□□□ 0.32
NEDD4P46934 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
NEDD4P46934 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.02■□□□□ 0.32
NEDD4P46934 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NEDD4P46934 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms