Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 AC084752.1-201ENST00000509766 622 ntBASIC15.21■□□□□ 0.03
MTHFRP42898 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.21■□□□□ 0.03
MTHFRP42898 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 AC027237.1-201ENST00000560942 655 ntBASIC15.21■□□□□ 0.03
MTHFRP42898 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.21■□□□□ 0.03
MTHFRP42898 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
MTHFRP42898 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
MTHFRP42898 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MTHFRP42898 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MTHFRP42898 CICP24-201ENST00000605464 2705 ntBASIC15.21■□□□□ 0.02
MTHFRP42898 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
MTHFRP42898 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.21■□□□□ 0.02
MTHFRP42898 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.21■□□□□ 0.02
MTHFRP42898 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
MTHFRP42898 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.2■□□□□ 0.02
MTHFRP42898 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 MIR600HG-201ENST00000449175 5984 ntBASIC15.2■□□□□ 0.02
MTHFRP42898 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 KRT17P5-201ENST00000332088 839 ntBASIC15.2■□□□□ 0.02
MTHFRP42898 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MTHFRP42898 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.2■□□□□ 0.02
MTHFRP42898 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 MIR5196-201ENST00000578146 115 ntBASIC15.2■□□□□ 0.02
MTHFRP42898 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC15.2■□□□□ 0.02
MTHFRP42898 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
MTHFRP42898 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.2■□□□□ 0.02
MTHFRP42898 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MTHFRP42898 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MTHFRP42898 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.2■□□□□ 0.02
MTHFRP42898 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MTHFRP42898 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MTHFRP42898 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AP000845.1-201ENST00000581677 2131 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 AL357563.1-201ENST00000404728 395 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.19■□□□□ 0.02
MTHFRP42898 AL512306.1-201ENST00000432698 848 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.19■□□□□ 0.02
MTHFRP42898 DPY19L2P5-201ENST00000456300 331 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 AC024293.1-201ENST00000467930 498 ntBASIC15.19■□□□□ 0.02
MTHFRP42898 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MTHFRP42898 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.19■□□□□ 0.02
MTHFRP42898 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.19■□□□□ 0.02
MTHFRP42898 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms