Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDE6BP35913 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.71■□□□□ 0.43
PDE6BP35913 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PDE6BP35913 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 AC005740.1-201ENST00000515639 522 ntBASIC17.71■□□□□ 0.43
PDE6BP35913 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.71■□□□□ 0.43
PDE6BP35913 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 AC132872.4-202ENST00000622924 2756 ntBASIC17.71■□□□□ 0.43
PDE6BP35913 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PDE6BP35913 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PDE6BP35913 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PDE6BP35913 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PDE6BP35913 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 AC019109.1-201ENST00000401725 1874 ntBASIC17.7■□□□□ 0.42
PDE6BP35913 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 OR7E115P-201ENST00000382617 1024 ntBASIC17.7■□□□□ 0.42
PDE6BP35913 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.7■□□□□ 0.42
PDE6BP35913 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.7■□□□□ 0.42
PDE6BP35913 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.7■□□□□ 0.42
PDE6BP35913 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PDE6BP35913 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.7■□□□□ 0.42
PDE6BP35913 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.7■□□□□ 0.42
PDE6BP35913 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PDE6BP35913 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PDE6BP35913 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.69■□□□□ 0.42
PDE6BP35913 ODCP-201ENST00000459650 1639 ntBASIC17.69■□□□□ 0.42
PDE6BP35913 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms