Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AL354877.1-201ENST00000424412 413 ntBASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MIR4259-201ENST00000584466 101 ntBASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AC012617.1-204ENST00000586340 2305 ntBASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DPA1P20036 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AL161932.2-201ENST00000435436 679 ntBASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AL157407.1-201ENST00000435784 904 ntBASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AL645933.1-201ENST00000440087 609 ntBASIC14.72□□□□□ -0.05
HLA-DPA1P20036 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.72□□□□□ -0.05
HLA-DPA1P20036 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DPA1P20036 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 TCAM1P-207ENST00000485295 1537 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 AC244394.1-201ENST00000435000 1665 ntBASIC14.71□□□□□ -0.05
HLA-DPA1P20036 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DPA1P20036 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 256.6 ms