Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 AC104784.1-201ENST00000473096 294 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 RN7SL258P-201ENST00000478664 300 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
ERCC3P19447 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.9■□□□□ 0.3
ERCC3P19447 AC026803.1-201ENST00000569130 274 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.9■□□□□ 0.3
ERCC3P19447 AL109837.1-201ENST00000603272 613 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 MEG3_2.1-201ENST00000611456 105 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 LINC00552-201ENST00000625151 2579 ntBASIC16.9■□□□□ 0.3
ERCC3P19447 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ERCC3P19447 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
ERCC3P19447 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.9■□□□□ 0.3
ERCC3P19447 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ERCC3P19447 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.9■□□□□ 0.3
ERCC3P19447 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
ERCC3P19447 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 AC023908.3-201ENST00000564211 3047 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
ERCC3P19447 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 FGD5P1-202ENST00000614866 2498 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.89■□□□□ 0.29
ERCC3P19447 AC098935.1-201ENST00000446057 611 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 RN7SL181P-201ENST00000462921 277 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 RN7SL67P-201ENST00000492147 296 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.89■□□□□ 0.29
ERCC3P19447 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
ERCC3P19447 AC133540.1-201ENST00000620845 1019 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 AL805961.1-201ENST00000642026 753 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ERCC3P19447 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.89■□□□□ 0.29
ERCC3P19447 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ERCC3P19447 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ERCC3P19447 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ERCC3P19447 WASH3P-207ENST00000560956 1394 ntBASIC16.89■□□□□ 0.29
ERCC3P19447 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.89■□□□□ 0.29
ERCC3P19447 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.88■□□□□ 0.29
ERCC3P19447 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.88■□□□□ 0.29
ERCC3P19447 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.88■□□□□ 0.29
ERCC3P19447 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ERCC3P19447 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.88■□□□□ 0.29
ERCC3P19447 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms