Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NCK1P16333 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NCK1P16333 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 AP006288.1-201ENST00000446065 395 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.83□□□□□ -0.2
NCK1P16333 FO681548.1-201ENST00000455617 1132 ntBASIC13.83□□□□□ -0.2
NCK1P16333 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 IGHV3-42-201ENST00000520410 361 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
NCK1P16333 AC023310.3-201ENST00000557027 670 ntBASIC13.83□□□□□ -0.2
NCK1P16333 SORD2P-201ENST00000558556 1069 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AC103988.2-201ENST00000561804 725 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AC100756.1-201ENST00000562736 682 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AC120045.2-201ENST00000567334 178 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AC138749.3-201ENST00000567691 622 ntBASIC13.83□□□□□ -0.2
NCK1P16333 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.83□□□□□ -0.2
NCK1P16333 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 AL158211.3-201ENST00000607385 239 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AC116165.1-201ENST00000611806 668 ntBASIC13.83□□□□□ -0.2
NCK1P16333 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.83□□□□□ -0.2
NCK1P16333 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 LRRC59-203ENST00000576448 1531 ntBASIC13.83□□□□□ -0.2
NCK1P16333 AL138725.1-201ENST00000407347 1314 ntBASIC13.83□□□□□ -0.2
NCK1P16333 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NCK1P16333 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NCK1P16333 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NCK1P16333 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NCK1P16333 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.83□□□□□ -0.2
NCK1P16333 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NCK1P16333 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 AGAP12P-201ENST00000585227 2359 ntBASIC13.82□□□□□ -0.2
NCK1P16333 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 INTS4P2-202ENST00000614726 2019 ntBASIC13.82□□□□□ -0.2
NCK1P16333 KHSRPP1-201ENST00000427983 1768 ntBASIC13.82□□□□□ -0.2
NCK1P16333 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.82□□□□□ -0.2
NCK1P16333 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 GIMAP3P-201ENST00000495150 836 ntBASIC13.82□□□□□ -0.2
NCK1P16333 GCOM2-201ENST00000509133 1104 ntBASIC13.82□□□□□ -0.2
NCK1P16333 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.82□□□□□ -0.2
NCK1P16333 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 AC104794.3-201ENST00000566840 1248 ntBASIC13.82□□□□□ -0.2
NCK1P16333 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
NCK1P16333 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 AL390955.2-201ENST00000603032 514 ntBASIC13.82□□□□□ -0.2
NCK1P16333 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NCK1P16333 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 AC139712.1-201ENST00000378256 1875 ntBASIC13.82□□□□□ -0.2
NCK1P16333 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NCK1P16333 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
NCK1P16333 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms