Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 MTND4P22-201ENST00000413116 1169 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 ACTBP7-201ENST00000418351 1124 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.54□□□□□ -0.08
HOXB3P14651 DSTNP1-201ENST00000419906 465 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AC079178.1-201ENST00000420915 656 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AC092447.3-201ENST00000426027 686 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 RAB28P2-201ENST00000454299 641 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 RPL5P23-201ENST00000496040 868 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC14.54□□□□□ -0.08
HOXB3P14651 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC007066.2-202ENST00000566531 914 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.54□□□□□ -0.08
HOXB3P14651 AC078899.4-201ENST00000593952 1113 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AC087683.2-201ENST00000611384 326 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AC138466.3-201ENST00000619983 221 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AC017037.4-201ENST00000624526 826 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 AL603764.1-201ENST00000636452 321 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 CIR1P2-201ENST00000514821 1342 ntBASIC14.54□□□□□ -0.08
HOXB3P14651 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.54□□□□□ -0.08
HOXB3P14651 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HOXB3P14651 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HOXB3P14651 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HOXB3P14651 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 TUBBP5-203ENST00000508529 1334 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 ACTG1P2-201ENST00000415776 1125 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 ACTG1P11-201ENST00000425411 1125 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 POM121L10P-201ENST00000436994 1285 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 CHMP1AP1-201ENST00000445563 662 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 HIST2H2BB-201ENST00000449108 381 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.53□□□□□ -0.08
HOXB3P14651 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.53□□□□□ -0.08
HOXB3P14651 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 AC100850.1-201ENST00000506768 649 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 FAM86KP-201ENST00000509817 987 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HOXB3P14651 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC14.53□□□□□ -0.08
HOXB3P14651 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC14.53□□□□□ -0.08
HOXB3P14651 ZACNP1-201ENST00000612259 710 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 AC091544.8-201ENST00000619490 361 ntBASIC14.53□□□□□ -0.08
HOXB3P14651 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC14.53□□□□□ -0.08
HOXB3P14651 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HOXB3P14651 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms