Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
MT-ND1P03886 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
MT-ND1P03886 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
MT-ND1P03886 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.82□□□□□ -0.2
MT-ND1P03886 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.82□□□□□ -0.2
MT-ND1P03886 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 AL645937.2-201ENST00000396808 931 ntBASIC13.82□□□□□ -0.2
MT-ND1P03886 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.82□□□□□ -0.2
MT-ND1P03886 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 AL512638.1-201ENST00000457493 794 ntBASIC13.82□□□□□ -0.2
MT-ND1P03886 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 AC026410.3-201ENST00000514280 936 ntBASIC13.82□□□□□ -0.2
MT-ND1P03886 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.82□□□□□ -0.2
MT-ND1P03886 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.82□□□□□ -0.2
MT-ND1P03886 AC092364.2-202ENST00000597012 1073 ntBASIC13.82□□□□□ -0.2
MT-ND1P03886 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
MT-ND1P03886 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.82□□□□□ -0.2
MT-ND1P03886 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
MT-ND1P03886 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
MT-ND1P03886 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
MT-ND1P03886 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.81□□□□□ -0.2
MT-ND1P03886 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.81□□□□□ -0.2
MT-ND1P03886 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
MT-ND1P03886 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.81□□□□□ -0.2
MT-ND1P03886 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.81□□□□□ -0.2
MT-ND1P03886 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.81□□□□□ -0.2
MT-ND1P03886 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.81□□□□□ -0.2
MT-ND1P03886 RN7SL399P-201ENST00000471648 279 ntBASIC13.81□□□□□ -0.2
MT-ND1P03886 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.81□□□□□ -0.2
MT-ND1P03886 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
MT-ND1P03886 AC104794.3-201ENST00000566840 1248 ntBASIC13.81□□□□□ -0.2
MT-ND1P03886 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.81□□□□□ -0.2
MT-ND1P03886 AL049840.4-201ENST00000602422 811 ntBASIC13.81□□□□□ -0.2
MT-ND1P03886 AC093512.1-201ENST00000617969 520 ntBASIC13.81□□□□□ -0.2
MT-ND1P03886 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MT-ND1P03886 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.81□□□□□ -0.2
MT-ND1P03886 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms