Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CNOT4O95628 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.04□□□□□ -0.32
CNOT4O95628 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CNOT4O95628 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 AL662890.1-201ENST00000396818 632 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 FNTAP2-201ENST00000430308 634 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.03□□□□□ -0.32
CNOT4O95628 AC005077.2-201ENST00000449786 690 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 AC091804.1-201ENST00000486888 567 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.03□□□□□ -0.32
CNOT4O95628 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.03□□□□□ -0.32
CNOT4O95628 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.03□□□□□ -0.32
CNOT4O95628 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 AC100827.2-201ENST00000563214 1194 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.03□□□□□ -0.32
CNOT4O95628 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.03□□□□□ -0.32
CNOT4O95628 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 AC009884.2-201ENST00000603110 324 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CNOT4O95628 AC007663.3-201ENST00000609632 465 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.03□□□□□ -0.32
CNOT4O95628 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 AL162426.1-201ENST00000624141 743 ntBASIC13.03□□□□□ -0.32
CNOT4O95628 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.03□□□□□ -0.32
CNOT4O95628 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CNOT4O95628 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.03□□□□□ -0.32
CNOT4O95628 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CNOT4O95628 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms