Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 LILRP2-202ENST00000413572 1383 ntBASIC21.19■□□□□ 0.98
RAPGEF3O95398 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF3O95398 AL365203.3-201ENST00000609742 2057 ntBASIC21.19■□□□□ 0.98
RAPGEF3O95398 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF3O95398 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF3O95398 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
RAPGEF3O95398 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPGEF3O95398 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 MIR632-201ENST00000385193 94 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 OR4C14P-201ENST00000440929 923 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 PSME2P2-201ENST00000453033 700 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 AP000533.1-201ENST00000456143 1177 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 VDAC1P11-201ENST00000458323 852 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 AC007679.1-201ENST00000458609 502 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 RN7SL523P-201ENST00000484401 298 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 AC008494.1-201ENST00000497612 796 ntBASIC21.18■□□□□ 0.98
RAPGEF3O95398 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPGEF3O95398 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPGEF3O95398 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 U73169.1-201ENST00000395152 367 ntBASIC21.17■□□□□ 0.98
RAPGEF3O95398 KRT8P6-201ENST00000399259 1207 ntBASIC21.17■□□□□ 0.98
RAPGEF3O95398 CCND3P1-201ENST00000438347 580 ntBASIC21.17■□□□□ 0.98
RAPGEF3O95398 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 RN7SL480P-201ENST00000581481 294 ntBASIC21.17■□□□□ 0.98
RAPGEF3O95398 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 AC092115.1-201ENST00000566277 1402 ntBASIC21.17■□□□□ 0.98
RAPGEF3O95398 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RAPGEF3O95398 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPGEF3O95398 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 MX1-218ENST00000619682 1980 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 RPL10-203ENST00000406022 748 ntTSL 3 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 RN7SL684P-201ENST00000465665 294 ntBASIC21.16■□□□□ 0.98
RAPGEF3O95398 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 CLPP-205ENST00000596605 646 ntTSL 2 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RAPGEF3O95398 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAPGEF3O95398 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms