Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 AC023157.3-201ENST00000619086 2088 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.68■□□□□ 0.1
CSPG5O95196 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 RNA5SP359-201ENST00000364838 113 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 AL157407.1-201ENST00000435784 904 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.68■□□□□ 0.1
CSPG5O95196 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 IGHV3-37-201ENST00000518544 340 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 AP003398.1-201ENST00000531124 318 ntBASIC15.68■□□□□ 0.1
CSPG5O95196 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.68■□□□□ 0.1
CSPG5O95196 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CSPG5O95196 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.68■□□□□ 0.1
CSPG5O95196 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.68■□□□□ 0.1
CSPG5O95196 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSPG5O95196 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.68■□□□□ 0.1
CSPG5O95196 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 AL627422.1-201ENST00000434104 580 ntBASIC15.67■□□□□ 0.1
CSPG5O95196 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG5O95196 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG5O95196 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG5O95196 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.67■□□□□ 0.1
CSPG5O95196 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.67■□□□□ 0.1
CSPG5O95196 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 AC023024.2-201ENST00000623561 1993 ntBASIC15.67■□□□□ 0.1
CSPG5O95196 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CSPG5O95196 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 KRT18P9-201ENST00000604826 1300 ntBASIC15.67■□□□□ 0.1
CSPG5O95196 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.67■□□□□ 0.1
CSPG5O95196 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSPG5O95196 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.66■□□□□ 0.1
CSPG5O95196 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSPG5O95196 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms