Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 BRD7P5-201ENST00000299197 1822 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 RPS9P1-201ENST00000419943 583 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 IMP3P2-201ENST00000489760 475 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 AC116345.2-201ENST00000512837 523 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 MIR4754-201ENST00000582477 89 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.62■□□□□ 0.25
CYTH3O43739 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 FRMPD2B-201ENST00000431305 1347 ntBASIC16.62■□□□□ 0.25
CYTH3O43739 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
CYTH3O43739 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CYTH3O43739 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CYTH3O43739 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 AC117489.1-201ENST00000625169 3217 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 AC005089.1-201ENST00000619486 2241 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 LINC01230-201ENST00000625222 3017 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.61■□□□□ 0.25
CYTH3O43739 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 AC006335.1-201ENST00000445200 547 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 AC242376.1-201ENST00000559033 726 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 AC105129.2-201ENST00000559536 390 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 AC140658.4-201ENST00000561990 352 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 AL109837.1-201ENST00000603272 613 ntBASIC16.61■□□□□ 0.25
CYTH3O43739 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.61■□□□□ 0.25
CYTH3O43739 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.61■□□□□ 0.25
CYTH3O43739 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.61■□□□□ 0.25
CYTH3O43739 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CYTH3O43739 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms