Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK2O00526 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
UPK2O00526 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 HARS-202ENST00000415192 1401 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK2O00526 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
UPK2O00526 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 C2orf27AP3-201ENST00000434123 579 ntBASIC11.72□□□□□ -0.53
UPK2O00526 FAM8A4P-201ENST00000435433 1213 ntBASIC11.72□□□□□ -0.53
UPK2O00526 AL161932.2-201ENST00000435436 679 ntBASIC11.72□□□□□ -0.53
UPK2O00526 AL035414.1-201ENST00000451327 857 ntBASIC11.72□□□□□ -0.53
UPK2O00526 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC11.72□□□□□ -0.53
UPK2O00526 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
UPK2O00526 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
UPK2O00526 GNRHR2-203ENST00000581100 1187 ntBASIC11.72□□□□□ -0.53
UPK2O00526 OR10B1P-201ENST00000601666 907 ntBASIC11.72□□□□□ -0.53
UPK2O00526 AL354718.3-201ENST00000616414 581 ntBASIC11.72□□□□□ -0.53
UPK2O00526 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC11.72□□□□□ -0.53
UPK2O00526 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK2O00526 CR382287.1-201ENST00000623954 586 ntBASIC11.72□□□□□ -0.53
UPK2O00526 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.72□□□□□ -0.53
UPK2O00526 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK2O00526 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.72□□□□□ -0.53
UPK2O00526 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK2O00526 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK2O00526 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK2O00526 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
UPK2O00526 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK2O00526 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.71□□□□□ -0.53
UPK2O00526 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK2O00526 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.71□□□□□ -0.53
UPK2O00526 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK2O00526 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK2O00526 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK2O00526 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms