Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 COX5BP8-201ENST00000416911 349 ntBASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC027601.3-201ENST00000622907 509 ntBASIC11.76□□□□□ -0.53
SRRM4A7MD48 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC009093.10-201ENST00000641956 1442 ntBASIC11.76□□□□□ -0.53
SRRM4A7MD48 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 KRT8P4-201ENST00000509735 1454 ntBASIC11.76□□□□□ -0.53
SRRM4A7MD48 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SRRM4A7MD48 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.76□□□□□ -0.53
SRRM4A7MD48 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AL136309.1-201ENST00000403917 691 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 MIR1202-201ENST00000408529 83 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC027237.1-201ENST00000560942 655 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 MIR3197-201ENST00000582241 73 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC008825.2-201ENST00000603374 718 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.75□□□□□ -0.53
SRRM4A7MD48 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SRRM4A7MD48 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
SRRM4A7MD48 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms