Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 AL008638.5-201ENST00000623814 1298 ntBASIC12.08□□□□□ -0.48
A0A1W2PRF3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
A0A1W2PRF3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
A0A1W2PRF3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AC018442.1-201ENST00000421439 2061 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AC018735.1-201ENST00000437208 1502 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CICP24-201ENST00000605464 2705 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 SHC1P1-201ENST00000425230 1745 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 MIR3615-201ENST00000581999 87 ntBASIC12.07□□□□□ -0.48
A0A1W2PRF3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
A0A1W2PRF3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
A0A1W2PRF3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
A0A1W2PRF3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
A0A1W2PRF3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms