Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 RPSAP6-201ENST00000417882 882 ntBASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 RPSAP12-201ENST00000435879 888 ntBASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 RNLS-203ENST00000437752 525 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 AC006116.2-201ENST00000589958 988 ntBASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC21.21■□□□□ 0.99
CDC42BPBQ9Y5S2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
CDC42BPBQ9Y5S2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
CDC42BPBQ9Y5S2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC21.2■□□□□ 0.99
CDC42BPBQ9Y5S2 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
CDC42BPBQ9Y5S2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AC023906.1-201ENST00000486386 453 ntBASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 IGHEP1-201ENST00000521393 651 ntBASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 AC092384.3-202ENST00000564646 2873 ntBASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC21.2■□□□□ 0.98
CDC42BPBQ9Y5S2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 FDPSP7-201ENST00000429043 1054 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AL136084.1-201ENST00000449172 318 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AC078814.4-201ENST00000546650 327 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 MIR8071-1-201ENST00000616769 65 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 MIR8071-2-201ENST00000616772 65 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AC132872.4-202ENST00000622924 2756 ntBASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC21.19■□□□□ 0.98
CDC42BPBQ9Y5S2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 HIST1H2APS2-201ENST00000454426 370 ntBASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 AC112250.1-201ENST00000504640 745 ntBASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 KRT8P34-201ENST00000577607 1044 ntBASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDC42BPBQ9Y5S2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms