Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AC015802.1-201ENST00000588104 1449 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 Z93015.1-201ENST00000451718 390 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 RPSAP36-202ENST00000494591 1261 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 FAM86HP-204ENST00000513466 959 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AC244157.2-201ENST00000616239 1006 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 KRT8P28-201ENST00000433288 1390 ntBASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CUEDC1Q9NWM3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AC015818.8-201ENST00000587907 1519 ntBASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 MTX1P1-201ENST00000440904 838 ntBASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 MPRIPP1-201ENST00000452433 1089 ntBASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AC027601.3-201ENST00000622907 509 ntBASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CUEDC1Q9NWM3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC097376.2-205ENST00000610159 5334 ntBASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CUEDC1Q9NWM3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms