Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
UPF3BQ9BZI7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UPF3BQ9BZI7 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
UPF3BQ9BZI7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AL157996.1-201ENST00000624684 2299 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC004945.1-201ENST00000416738 983 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC112492.5-201ENST00000421897 457 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 TTTY23B-201ENST00000442790 549 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC078819.1-201ENST00000547454 765 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC012085.1-201ENST00000548270 765 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 MIR4525-201ENST00000580000 75 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC233724.13-201ENST00000598383 410 ntBASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF3BQ9BZI7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TCAM1P-207ENST00000485295 1537 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 C2orf27AP3-201ENST00000434123 579 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 FAM8A4P-201ENST00000435433 1213 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AC015936.2-201ENST00000593177 259 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AL354718.3-201ENST00000616414 581 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 CR382287.1-201ENST00000623954 586 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 AC002472.3-201ENST00000640124 621 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 LINC02486-201ENST00000604157 3000 ntBASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UPF3BQ9BZI7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UPF3BQ9BZI7 AC111170.3-201ENST00000624282 2464 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms