Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 OR3A1-202ENST00000615105 966 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 MTHFR-210ENST00000641407 2387 ntBASIC12.09□□□□□ -0.47
CSMD1Q96PZ7 GUCY2EP-203ENST00000531117 1918 ntBASIC12.08□□□□□ -0.47
CSMD1Q96PZ7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.47
CSMD1Q96PZ7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
CSMD1Q96PZ7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
CSMD1Q96PZ7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC007881.1-201ENST00000437460 187 ntBASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 TPST2P1-201ENST00000564073 1102 ntBASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 TLE1P1-201ENST00000422965 589 ntBASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 RN7SL340P-201ENST00000470792 296 ntBASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 RN7SL672P-201ENST00000474091 317 ntBASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CSMD1Q96PZ7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AC006486.2-201ENST00000624246 2199 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AL008638.4-201ENST00000624792 1315 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PEBP1P3-201ENST00000455475 548 ntBASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 MST1L-204ENST00000545160 559 ntTSL 4 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 MYL6-215ENST00000549566 685 ntTSL 2 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CSMD1Q96PZ7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms