Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
NSMCE2Q96MF7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 KRT18P13-201ENST00000400056 1290 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AL589987.1-201ENST00000453380 819 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC103988.2-201ENST00000561804 725 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 RARRES2P5-201ENST00000564013 466 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC138761.1-201ENST00000584393 385 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AL662799.1-202ENST00000614205 422 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC007431.3-201ENST00000623221 587 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 NCLP1-201ENST00000445357 1963 ntBASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NSMCE2Q96MF7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 RNU1-114P-201ENST00000365297 166 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 AC211486.1-202ENST00000416371 468 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 AC114812.1-204ENST00000449669 728 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 GIMAP3P-201ENST00000495150 836 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 AC211476.1-201ENST00000503899 468 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 Z92544.3-201ENST00000624747 417 ntBASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NSMCE2Q96MF7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms