Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 RNA5SP412-201ENST00000516234 123 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC010328.2-201ENST00000597698 1111 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC009542.2-202ENST00000619004 1067 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 MIR193BHG-211ENST00000641433 5365 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 KRT8P28-201ENST00000433288 1390 ntBASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CPEB3Q8NE35 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 E2F3P2-201ENST00000447755 1422 ntBASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AL035414.1-201ENST00000451327 857 ntBASIC12.8□□□□□ -0.36
CPEB3Q8NE35 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 DUX4L46-201ENST00000566845 751 ntBASIC12.8□□□□□ -0.36
CPEB3Q8NE35 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 AC012617.1-204ENST00000586340 2305 ntBASIC12.8□□□□□ -0.36
CPEB3Q8NE35 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CPEB3Q8NE35 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 RN7SL832P-201ENST00000607781 1756 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AC027601.5-201ENST00000624065 2482 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms