Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RN7SL11P-201ENST00000471305 293 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AL591471.1-201ENST00000621855 229 ntBASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.68□□□□□ -0.22
ARHGEF39Q8N4T4 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 IGHJ2P-201ENST00000454480 60 ntBASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AL022334.2-201ENST00000610000 484 ntBASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 HSPA8P5-201ENST00000456928 2069 ntBASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ARHGEF39Q8N4T4 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 AL022313.4-201ENST00000562756 2046 ntBASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ARHGEF39Q8N4T4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms