Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 MIR3652-201ENST00000579335 131 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 TP73-AS1-207ENST00000624167 988 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.07□□□□□ -0.64
MRPL54Q6P161 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.07□□□□□ -0.64
MRPL54Q6P161 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
MRPL54Q6P161 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 MKRN5P-201ENST00000445263 1467 ntBASIC11.06□□□□□ -0.64
MRPL54Q6P161 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 HIST3H2BA-201ENST00000436555 524 ntBASIC11.06□□□□□ -0.64
MRPL54Q6P161 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 AC099522.2-201ENST00000607001 744 ntBASIC11.06□□□□□ -0.64
MRPL54Q6P161 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL54Q6P161 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL54Q6P161 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL54Q6P161 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL54Q6P161 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms